Reading and Writing: io

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Reading and Writing: io#

Reading#

Optimised reading wrapper functions for partial loading of anndata.AnnData slots and loading matrices as backed dask arrays:

read_anndata

Read an AnnData file from zarr or h5ad format.

read_slot

Read a specific slot from a zarr or h5py group.

Writing#

Optimised writing with linked zarr files to save storage space when input and output slots remain the same:

write_zarr_linked

Write AnnData object to a linked zarr file.
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