Metrics: me#

Graph distance comparison#

compare_distances

Compare distances of same edges but from different representations.

compute_missing_distances

Compute missing distances.

get_knn

Get k-nearest neighbors for each row in a sparse matrix.

plot_distances_scatter

Diagnostic plot for distance computation.

plot_ranked_distances

Diagnostic plot for distance computation.

KNN overlap metric#

get_adjacency

Retrieve adjacency matrix from distances or connectivities.

knn_overlap

kNN-based graph similarity